Modify a Linux distribution, say, Debian, to only install a minimal system of binary packages, then compile the rest of the packages from source packages (apt-get source).
Work on minimizing the minimal system. Inspired by Reproducible Builds, which in turn has recently been brought to the forefront in needing to protect against the NSA compromising a central build server.
Gentoo does this, but we would like something more convenient, that acts like Debian except takes longer (perhaps a lot longer) to install packages.
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